Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs61943902 chr12:132300838 C/T 0.000146 489 31.73 27.08 47.98 KM Plot
THCA rs61969816 chr14:52036648 C/T 0.000118 490 31.6 31.37 25.47 KM Plot
THCA rs62078765 chr17:42553155 A/C 8.06E-5 501 31.47 36.4 53.23 KM Plot
THCA rs62078771 chr17:42591029 G/A 8.0E-5 502 31.47 36.4 53.23 KM Plot
THCA rs62078786 chr17:42601912 G/A 8.11E-5 499 31.47 36.83 53.23 KM Plot
THCA rs62081228 chr17:42526135 C/T 7.86E-5 503 31.47 32.9 53.23 KM Plot
THCA rs62143892 chr19:54032240 A/G 1.53E-6 502 31.47 33.4 21.63 KM Plot
THCA rs62388986 chr5:157179743 A/G 0.000135 501 31.93 28.53 31.13 KM Plot
THCA rs62388987 chr5:157180208 G/A 0.000135 501 31.93 28.53 31.13 KM Plot
THCA rs62426668 chr6:133225021 C/T 2.03E-6 497 31.42 33.7 30.22 KM Plot
THCA rs62426674 chr6:133227476 G/A 2.33E-6 497 31.45 32.9 30.22 KM Plot
THCA rs62458679 chr7:43951888 A/G 2.6E-9 502 31.15 33.52 30.83 KM Plot
THCA rs62458680 chr7:43952303 A/G 1.63E-9 500 31.27 33.38 31.03 KM Plot
THCA rs62458683 chr7:43958196 C/G 1.56E-9 502 31.15 33.5 31.03 KM Plot
THCA rs62458684 chr7:43958259 G/A 1.56E-9 502 31.15 33.5 31.03 KM Plot